This week I have been continuing my folding energy experiment. After my initial experiment, I have been repeating it about 100 more times. After I am finished I will average these results together. Next, I will repeat this experiment but change the threshold from greater than or equal to 0.1 to several different thresholds and repeat those experiments 100 times and average the results. Then, I will create a graph based on my results to show the effect of base-pairing probabilities on folding energy. Currently, I plan to either use GNU Plot or Microsoft Excel to generate the graphs.
I also plan to modify the length of the selected modified sequence from 100 to 75, 50, and 25. I will repeat each experiment 100 times respectively and also plan to generate graphs to visually represent the resulting data.
I also plan to modify the length of the selected modified sequence from 100 to 75, 50, and 25. I will repeat each experiment 100 times respectively and also plan to generate graphs to visually represent the resulting data.